Ingram, R., Gao, C., LeBon, J., Liu, Q., Mayoral, R.J., Sommer, S.S., Hoogenkamp, M., Riggs, A.D., and Bonifer, C. (2008) PAP-LMPCR for improved, allele-specific footprinting and automated chromatin fine structure analysis. Nucleic Acids Res 36:e19.
Shen, Y., Matsuno, Y., Fouse, S.D., Rao, N., Root, S., Xu, R.H., Pellegrini, M., Riggs, A.D., and Guoping Fan, G. (2008) X-inactivation in established lines of female human embryonic stem cells is non-random and prone to epigenetic alterations, Proc. Natl. Acad. Sci. USA 105:4709-14.
Chen, H.H., Lebon, J, Riggs, A.D. (2008) Analysis of RNA structure and RNA-protein interactions in mammalian cells by use of terminal transferase-dependent PCR. Methods Mol Biol. 488:319-41.
Hahn, M, Hahn, T., Dong-Hyun, L, Riggs, A.D., Esworthy, R.S., Kim, B., Chu F.F. and Gerd P. Pfeifer, G.P. (2008) Methylation of Polycomb gene targets in cancer is mediated by inflammation. Cancer Res. 68:10280-9.
Tibor A. Rauch, T.A., Xiwei Wu, X., Xueyan Zhong, X, Riggs, A.D., and Pfeifer, G.P. (2009) A human B cell methylome at 100 base pair resolution. Proc. Natl. Acad. Sci. USA, 106:671-8.
Castanotto, D., Lingeman, R., Riggs, A.D., and Rossi, J.J. (2009) CRM1 mediates nuclear-cytoplasmic shuttling of mature microRNAs. Proc. Natl. Acad. Sci. USA, 106:21655-9.
Branciamore, S., Chen, Z.X., Riggs, A.D., and Rodin, S.N. (2010) CpG island clusters and pro-epigenetic selection for CpGs in protein-coding exons of HOX and other transcription factors. Proc. Natl. Acad. Sci. USA, 107:15485.
Qin, H, Wang, Z., Du, W., Lee. W., Wu, X., Riggs, A.D., and Liu, C.P. (2011) KIR3DL1 downregulation enhances inhibition of type 1 diabetes by autoantigen-specific regulatory T cells. Proc. Natl. Acad. Sci. USA, 108:2016.
Rauch, T.A., Wang, Z., Kernstine, K.H., Riggs, A.D., and Pfeifer, G.P. (2012) DNA Methylation Biomarkers for Lung Cancer. Tumor Biology 33:287-96.
Mahdavi, A., Ghazalli, N.W.M., Tzou, P., Feng, T., Dooling, L., Lo, M., Jin, L., Hsu, J., Jindall. G., Dong, C.Y., Lesman A., Liu, C.Y., Riggs A.D., Ku, T.H. and Tirrell, D.A. (2012) Improved Survival and Enhanced Function of Murine Pancreatic β-cell progenitors on Artificial Extracellular Matrix Proteins with Laminin-Based Sequences. Submitted.
Lee, H., Zhang, P., Herrmann, A., Yang, C., Xina, H., Wang, Z., Hoon, D.S.B., Forman, S.J., Jove, R., Riggs, A.D., and Hua Yua, H. (2012) Acetylated STAT3 is crucial for methylation of tumor suppressor gene promoters and inhibition by resveratrol results in demethylation. Proc Natl Acad Sci U S 109:7765-9.
Wang, D., Qin, H., Du, W., Shen, Y.W., Lee, W.H., Riggs, A.D., and Liu, C.P. (2012) Inhibition of Skp2 converts diabetogenic T cells to Foxp3+ regulatory T cells. Proc Natl Acad Sci U S A. 109:9493-8.
Tompkins, J.D., Hall, C., Chen, V.C., Wu, X, Hsu, D., Couture, L.A., and Riggs, A.D. (2012) Epigenetic Stability, Adaptability, and Reversibility in an Undifferentiated Human Embryonic Stem Cell Line. Proc Natl Acad Sci U S A. 109:12544-9.
Li, W., Tian, E., Chen, Z.X., Sun, G., Ye, P., Yang, S., Lu, D., Xie, J., Ho, T.V., Tsark, W., Wang, C., Horne, D., Riggs, A.D., Yip, R, Shi, Y. (2012) Identification of Oct4-activating compounds that enhance reprogramming efficiency. Proc Natl Acad Sci USA, 109:20853-8.
Ladopoulos, V., Hofemeister, H., Hoogenkamp, M., Riggs, A.D., Stewart, F. and Constanze Bonifer, C. (2013) The histone methyltransferase Mll2 (Kmt2b) is required for RNA Polymerase II association and protection from DNA-methylation at the MagohB CpG island promoter. Mol. Cell. Biol., in press.
Jin, L., Feng, T., Shih, H.P., Ricardo Zerda, R., Luo, A., Hsu, J., Mahdavi, A., Sander, M., Tirrell, D.A., Riggs, A.D. and Ku T.K. (2013) Colony Forming Cells in the Adult Mouse Pancreas are Expandable in Matrigel and Form Endocrine/acinar Colonies in Laminin Hydrogel. Proc. Natl Acad Sci USA, in press.
This is a partial list. Full publications list available upon request. Information on this page may be self-reported. Last updated 04/13
