A National Cancer Institute-designated Comprehensive Cancer Center

Make an appointment: 800-826-HOPE
Shively, John, Ph.D. Bookmark and Share

John Shively, Ph.D. Research

The Carcinoembryonic Antigen Gene Family
The CEA gene family comprises 30 genes located on chromosome 19. There are two subgroups or clusters, one includes CEA, NCA, BGP, CGM1, CGM2, and CGM6, and the other includes the PSGs (pregnancy specific glycoproteins). The first group are cell surface glycoproteins linked to the membrane either as type I transmembrane proteins (e.g. BGP, CGM1) or via a GPI (glycosylphosphatidylinositol) moiety (e.g. CEA, NCA, CGM2, CGM6). The second group are glycoproteins secreted by the placenta or fetus, hence the term "pregnancy specific." CEA was named for its discovery in fetal colon and colon carcinomas, but apparent absence in normal adult colon. NCA (non specific crossreacting antigen) and BGP (biliary glycoprotein) were found in normal tissues, especially in neutrophils and epithelial cells of the digestive tract. Later studies identified further members of the family designated "CGMs" for CEA-gene-man for the most part also expressed in neutrophils and epithelial cells (CGM6 is restricted to neutrophils). All are members of the Ig superfamily and have similar domain structures illustrated in Figure 1. While many in vitro studies have shown that CEA gene family members can function as homophilic cell adhesion molecules, their in vivo functions are poorly understood. In fact, in light of their apical expression in epithelial cells, we strongly doubt that they play a role in homotypic cell adhesion. Another possible function includes bacterial binding as exemplified by the recent finding that the N-domain of most of the family members bind Nisseria meningitis and gonorrhea. While the lack of an in vivo function has hampered studies in this field, the use of radiolabeled anti-CEA antibodies to target tumors of the colon, breast, ovary and lung has become an important tool for tumor imaging and therapy.
 
Functional Studies on BG
We have performed functional studies on BGP in three cell systems, the induced expressed of BGP in activated human T-cells, the constitutive expression of BGP in the normal human mammary cell line MCF10F under morphogenic conditions, and the transgene expression of BGP in the murine colon carcinoma cell line MC38. Activation of T-cells with anti-CD3 or PHA (phytohemagglutinin) plus IL-2 induces the expression of BGP (CD66a) over a 2-5 da period. Expression levels of CD66a are inversely correlated to CD25 (IL2R?) expression and fall when IL2 is removed from the media. CD66a is expressed as two isoforms, both with the long cytoplasmic tail that has the ITIM (immunoglobulin tyrosine phosphate inhibitory motif). When the cells are stimulated with anti-CD66a antibody, the ITIM is phosphorylated, suggesting that CD66a crosslinking delivers an inhibitory growth signal. Immunoprecipitation of CD66a co-precipitates TCR (T-cell receptor) associated molecules ZAP-70, Lck, and Vav. In addition, Shp-1, known to associate with the ITIM of BGP in epithelial cells, is co-precipitated, as are actin, myosin, and calmodulin. Current studies are aimed at linking these signaling pathways to functional studies.
 
MC-38 murine colorectal cells transfected with human BGP shown a strong association of BGP with cytoskeleton (actin-myosin filaments) after activation with anti-BGP antibodies and phosphorylation of the ITIM on BGP. Two dimensional gel electrophoresis analysis of the BGP immunoprecipitates from anti-BGP treated cells reveal 10-12 spots that have been analyzed by in situ trypsin digestion and LC/MS/MS (liquid chromatography/mass spectrometry/mass spectrometry) analysis. Comparative 2D gels are shown in Figure 3. Current studies are using GST-BGPcyt fusion proteins to determine if there is a direct association between the BGP cytoplasmic domain and the cytoskeleton, or if linking proteins are involved.
 
The MCF10F mammary epithelial cell line is capable of forming acini when grown in serum free conditions either in or on matrigel, a basement membrane mimic. While these cells express BGP before and after exposure to matrigel, the BGP expression is apical (luminal) in mature acini. If the cells are sorted into BGP high or low populations and grown on matrigel, the BGP high cells form acini exclusively, while the BGP low cells form mixtures of tubules and acini. We have also shown that MCF10F cells can yield a population of BGP negative, spindle shaped cells that have the phenotype of myoepithelial cells. The myoepithelial cells form web-like structures when grown alone, or surround the epithelial cells when grown in mixtures, resembling structures found in the mammary gland. These studies were originally prompted by the observation that BGP is down regulated in over 90% of colorectal cancers, but in only 30% of breast cancers. It has been postulated that since BGP is a product of fully differentiated cells and delivers a negative growth signal, its expression cannot be tolerated in tumor cells. This concept appears to be only partially true in breast cancer, and in the studies shown here, we suggest that BGP expression may occur early during morphogenesis without disrupting acini and tubule formation. Current studies are aimed at knocking out the expression of BGP in these cells to determine its possible role in differentiation.
 
Anti-CEA antibodies for tumor imaging and therapy
CEA is an excellent target antigen for cancers of the colon, breast, and lung. We have developed the anti-CEA antibody T84.66 which has a high affinity (1010 M-1) and specificity for CEA suitable for in vivo tumor targeting. We have conjugated the engineered mouse-human chimeric version of this antibody and its fragments with a variety of chelates including DTPA (diethyltriamine pentaacetic acid) and DOTA (tetraazacyclododecyltetraacetic acid) for radiometal labeling. Current efforts have focused on improving the biodistribution properties of the radiolabeled chelate-conjugates by increasing the metal conjugate stability and by introducing linkers that are chemically labile, allowing for greater blood clearance after tumor localization. The macrocycle DOTA has proven ideal for these studies. It has a high binding constant (10 23 M-1) for 111In(III) and 90Y(III), radiometal ions that have excellent emissions and half lives suitable for imaging and therapy, respectively. We have coupled DOTA to the amino acid cysteine, followed by addition of the homobifunctional, sulhydryl specific crosslinker BMH (bis-maleimidohexane) to form MC-DOTA which allows site specific conjugation to the cysteines in the hinge region of antibodies. When radiolabeled and injected into tumor bearing animals, the conjugate targets tumors with high uptake (>50% injected dose/g tumor) and has good blood clearance due to the slow breakdown of the succinimide bonds in the conjugate. We are now focusing on improving the rates of radiometal binding using both chemical and theoretical approaches. The latter approach involves a collaboration with Dr. William Goddard’s group at Cal Tech have performed ab initio calculations on DOTA-Y(III) complexes. We are now planning to scan theoretical combinatorial structures using this approach, followed by verification of the best structures through chemical synthesis and NMR studies.
 

Fibromyalgia Research Fund

The City of Hope Fibromyalgia Research Fund supports a specific research project on fibromyalgia that began around 2005 as a research study that enrolled patients from the fibromyalgia clinic of Dr. R. Paul St. Amand AMD collecting blood samples from FMS patients and their parents. 
 
The protocol was approved by the City of Hope Institutional Review Board (IRB) in 2005 [protocol number 04186] and has continued to accrue patients and their parents ever since.  The title of the project is “Immunological and genetic analysis of autoinflammatory genes in fibromyalgia.”  Collection of blood samples allowed the investigators to analyze (1) the presence of certain proteins called cytokines in the blood that reflect the nature and degree of immune activation of that patient with FMS and (2) collect DNA from the immune cells in the blood and sequence genes that are associated with autoinflammation with the hope that mutations in those genes would correlate with the disease. 
 
Furthermore, the investigators would determine if any mutations discovered were inherited at a higher frequency than expected, thus requiring the analysis of their parents’ genes.  To facilitate enrollment in this project, the investigators no longer require blood samples, but instead collect saliva for genetic analysis only.
 
More Information
 

Shively, John, Ph.D.

John Shively, Ph.D. Research

The Carcinoembryonic Antigen Gene Family
The CEA gene family comprises 30 genes located on chromosome 19. There are two subgroups or clusters, one includes CEA, NCA, BGP, CGM1, CGM2, and CGM6, and the other includes the PSGs (pregnancy specific glycoproteins). The first group are cell surface glycoproteins linked to the membrane either as type I transmembrane proteins (e.g. BGP, CGM1) or via a GPI (glycosylphosphatidylinositol) moiety (e.g. CEA, NCA, CGM2, CGM6). The second group are glycoproteins secreted by the placenta or fetus, hence the term "pregnancy specific." CEA was named for its discovery in fetal colon and colon carcinomas, but apparent absence in normal adult colon. NCA (non specific crossreacting antigen) and BGP (biliary glycoprotein) were found in normal tissues, especially in neutrophils and epithelial cells of the digestive tract. Later studies identified further members of the family designated "CGMs" for CEA-gene-man for the most part also expressed in neutrophils and epithelial cells (CGM6 is restricted to neutrophils). All are members of the Ig superfamily and have similar domain structures illustrated in Figure 1. While many in vitro studies have shown that CEA gene family members can function as homophilic cell adhesion molecules, their in vivo functions are poorly understood. In fact, in light of their apical expression in epithelial cells, we strongly doubt that they play a role in homotypic cell adhesion. Another possible function includes bacterial binding as exemplified by the recent finding that the N-domain of most of the family members bind Nisseria meningitis and gonorrhea. While the lack of an in vivo function has hampered studies in this field, the use of radiolabeled anti-CEA antibodies to target tumors of the colon, breast, ovary and lung has become an important tool for tumor imaging and therapy.
 
Functional Studies on BG
We have performed functional studies on BGP in three cell systems, the induced expressed of BGP in activated human T-cells, the constitutive expression of BGP in the normal human mammary cell line MCF10F under morphogenic conditions, and the transgene expression of BGP in the murine colon carcinoma cell line MC38. Activation of T-cells with anti-CD3 or PHA (phytohemagglutinin) plus IL-2 induces the expression of BGP (CD66a) over a 2-5 da period. Expression levels of CD66a are inversely correlated to CD25 (IL2R?) expression and fall when IL2 is removed from the media. CD66a is expressed as two isoforms, both with the long cytoplasmic tail that has the ITIM (immunoglobulin tyrosine phosphate inhibitory motif). When the cells are stimulated with anti-CD66a antibody, the ITIM is phosphorylated, suggesting that CD66a crosslinking delivers an inhibitory growth signal. Immunoprecipitation of CD66a co-precipitates TCR (T-cell receptor) associated molecules ZAP-70, Lck, and Vav. In addition, Shp-1, known to associate with the ITIM of BGP in epithelial cells, is co-precipitated, as are actin, myosin, and calmodulin. Current studies are aimed at linking these signaling pathways to functional studies.
 
MC-38 murine colorectal cells transfected with human BGP shown a strong association of BGP with cytoskeleton (actin-myosin filaments) after activation with anti-BGP antibodies and phosphorylation of the ITIM on BGP. Two dimensional gel electrophoresis analysis of the BGP immunoprecipitates from anti-BGP treated cells reveal 10-12 spots that have been analyzed by in situ trypsin digestion and LC/MS/MS (liquid chromatography/mass spectrometry/mass spectrometry) analysis. Comparative 2D gels are shown in Figure 3. Current studies are using GST-BGPcyt fusion proteins to determine if there is a direct association between the BGP cytoplasmic domain and the cytoskeleton, or if linking proteins are involved.
 
The MCF10F mammary epithelial cell line is capable of forming acini when grown in serum free conditions either in or on matrigel, a basement membrane mimic. While these cells express BGP before and after exposure to matrigel, the BGP expression is apical (luminal) in mature acini. If the cells are sorted into BGP high or low populations and grown on matrigel, the BGP high cells form acini exclusively, while the BGP low cells form mixtures of tubules and acini. We have also shown that MCF10F cells can yield a population of BGP negative, spindle shaped cells that have the phenotype of myoepithelial cells. The myoepithelial cells form web-like structures when grown alone, or surround the epithelial cells when grown in mixtures, resembling structures found in the mammary gland. These studies were originally prompted by the observation that BGP is down regulated in over 90% of colorectal cancers, but in only 30% of breast cancers. It has been postulated that since BGP is a product of fully differentiated cells and delivers a negative growth signal, its expression cannot be tolerated in tumor cells. This concept appears to be only partially true in breast cancer, and in the studies shown here, we suggest that BGP expression may occur early during morphogenesis without disrupting acini and tubule formation. Current studies are aimed at knocking out the expression of BGP in these cells to determine its possible role in differentiation.
 
Anti-CEA antibodies for tumor imaging and therapy
CEA is an excellent target antigen for cancers of the colon, breast, and lung. We have developed the anti-CEA antibody T84.66 which has a high affinity (1010 M-1) and specificity for CEA suitable for in vivo tumor targeting. We have conjugated the engineered mouse-human chimeric version of this antibody and its fragments with a variety of chelates including DTPA (diethyltriamine pentaacetic acid) and DOTA (tetraazacyclododecyltetraacetic acid) for radiometal labeling. Current efforts have focused on improving the biodistribution properties of the radiolabeled chelate-conjugates by increasing the metal conjugate stability and by introducing linkers that are chemically labile, allowing for greater blood clearance after tumor localization. The macrocycle DOTA has proven ideal for these studies. It has a high binding constant (10 23 M-1) for 111In(III) and 90Y(III), radiometal ions that have excellent emissions and half lives suitable for imaging and therapy, respectively. We have coupled DOTA to the amino acid cysteine, followed by addition of the homobifunctional, sulhydryl specific crosslinker BMH (bis-maleimidohexane) to form MC-DOTA which allows site specific conjugation to the cysteines in the hinge region of antibodies. When radiolabeled and injected into tumor bearing animals, the conjugate targets tumors with high uptake (>50% injected dose/g tumor) and has good blood clearance due to the slow breakdown of the succinimide bonds in the conjugate. We are now focusing on improving the rates of radiometal binding using both chemical and theoretical approaches. The latter approach involves a collaboration with Dr. William Goddard’s group at Cal Tech have performed ab initio calculations on DOTA-Y(III) complexes. We are now planning to scan theoretical combinatorial structures using this approach, followed by verification of the best structures through chemical synthesis and NMR studies.
 

Fibromyalgia Research Fund

Fibromyalgia Research Fund

The City of Hope Fibromyalgia Research Fund supports a specific research project on fibromyalgia that began around 2005 as a research study that enrolled patients from the fibromyalgia clinic of Dr. R. Paul St. Amand AMD collecting blood samples from FMS patients and their parents. 
 
The protocol was approved by the City of Hope Institutional Review Board (IRB) in 2005 [protocol number 04186] and has continued to accrue patients and their parents ever since.  The title of the project is “Immunological and genetic analysis of autoinflammatory genes in fibromyalgia.”  Collection of blood samples allowed the investigators to analyze (1) the presence of certain proteins called cytokines in the blood that reflect the nature and degree of immune activation of that patient with FMS and (2) collect DNA from the immune cells in the blood and sequence genes that are associated with autoinflammation with the hope that mutations in those genes would correlate with the disease. 
 
Furthermore, the investigators would determine if any mutations discovered were inherited at a higher frequency than expected, thus requiring the analysis of their parents’ genes.  To facilitate enrollment in this project, the investigators no longer require blood samples, but instead collect saliva for genetic analysis only.
 
More Information
 
Our Scientists

Our research laboratories are led by the best and brightest minds in scientific research.
 

Beckman Research Institute of City of Hope is internationally  recognized for its innovative biomedical research.
City of Hope is one of only 41 Comprehensive Cancer Centers in the country, the highest designation awarded by the National Cancer Institute to institutions that lead the way in cancer research, treatment, prevention and professional education.

Learn more about
City of Hope's institutional distinctions, breakthrough innovations and collaborations.
 
Develop new therapies, diagnostics and preventions in the fight against cancer and other life-threatening diseases.
 
Support Our Research
By giving to City of Hope, you support breakthrough discoveries in laboratory research that translate into lifesaving treatments for patients with cancer and other serious diseases.
 
 
 
 


NEWS & UPDATES
  • Scientists at City of Hope and UCLA have become the first to inhibit the expression of a protein, called TWIST that promotes tumor invasion and metastasis when activated by cancer cells. As such, they’ve taken the first step in developing a potential new therapy for some of the deadliest cancers, including ovar...
  • Upon completing her final round of chemotherapy for ovarian cancer earlier this month, Maria Velazquez-McIntyre, a 51-year-old Antelope Valley resident, celebrated the milestone by giving other patients a symbol of hope – a Survivor Bell. The bell may look ordinary, but for cancer patients undergoing chemothera...
  • Many Americans understand that obesity is tied to heart disease and diabetes but, according to a new survey, too few – only 7 percent – know that obesity increases the risk of cancer. Specific biological characteristics can increase cancer risk in obese people, and multiple studies have shown correlations betwe...
  • As breast cancer survivors know, the disease’s impact lingers in ways both big and small long after treatment has ended. A new study suggests that weight gain – and a possible corresponding increase in heart disease and diabetes risk – may be part of that impact. In the first study to evaluate weight chan...
  • Becoming what’s known as an independent scientific researcher is no small task, especially when working to translate research into meaningful health outcomes. Yet that independent status is vital, enabling researchers to lead studies and avenues of inquiry that they believe to be promising. Clinicians, especial...
  • 720 days. That’s how long Alex Tung, 38, had to give up surfing after being diagnosed with acute myeloid leukemia. For most people, even some surfers, such a hiatus wouldn’t be a big deal, but for Tung, surfing has been everything. The Southern California resident began surfing when he was in elemen...
  • There are few among us who have not experienced loss of a friend or loved one, often without warning, or like those of us who care for people with cancer, after a lingering illness. It is a time when emotions run high and deep, and as time passes from the moment of loss, we often […]
  • For the past four years, neurosurgeon and scientist Rahul Jandial, M.D., Ph.D., has been studying how breast cancer cells spread, or metastasize, to the brain, where they become life-threatening tumors. Known as secondary brain tumors, these cancers have become increasingly common as treatment advances have ena...
  • Cutaneous T cell lymphomas are types of non-Hodgkin lymphoma that arise when infection-fighting white blood cells in the lymphatic system – called lymphocytes – become malignant and affect the skin. A primary symptom is a rash that arises initially in areas of the skin that are not normally exposed to sunlight....
  • There’s science camp, and then there’s “mystery” science camp. City of Hope’s new science camp for middle school students is of the especially engaging latter variety. From Monday, July 13, to Friday, July 17, rising middle-school students from across the San Gabriel Valley were presented with a “patient” with ...
  • Women diagnosed with breast cancer quickly learn their tumor’s type, meaning the characteristics that fuel its growth. That label guides the treatment of their disease, as well as their prognosis when it comes to treatment effectiveness. Sometimes, however, doctors can’t accurately predict treatment effectivene...
  • In years past, Bladder Cancer Awareness Month has been a sobering reminder of a disease with few treatment options. For patients with metastatic disease (disease that has spread from the bladder to distant organs), average survival is typically just over one year. Fortunately, things are changing. Academic inst...
  • Tina Wang was diagnosed with Stage 4 diffuse large b cell lymphoma at age 22. She first sought treatment at her local hospital, undergoing two cycles of treatment. When the treatment failed to eradicate her cancer, she came to City of Hope. Here, Wang underwent an autologous stem cell transplant and participate...
  • When Gilbert Fresquez, 72, lost an excessive amount of weight in late 2012, he didn’t think much of it. He assumed it was a side effect from a recent surgery to remove a carcinoid tumor in his small intestine. It wasn’t until a couple of years later during a routine doctor’s visit that the retired […]
  • Bladder cancer is a disease in which malignant (cancer) cells form in the tissues of the bladder. Among both men and women, the rates of new cancers have decreased in recent years. Death rates, meanwhile, have declined among women and have held stable among men. Specialists at City of Hope are internationally r...