Platform

 

No. of reads
(flow cell)

 

 

Output bases
(flow cell)

 

 

Run time

 

Read length

 

 

Cost per Run

 

 

Cost per MB

 

 

Errors

 

Illumina Hiseq 2500 Regular Mode

 

1.5 billion SE or PE   300 Gb   2/11 days 2x100bp   $12,674   $0.04   Substitution

Illumina Hiseq2500
Rapid Mode

 

300 million SE or PE   90 Gb   7/40 hr 2x150bp   $3,356   $0.04   Substitution

Life Tech Ion
Proton

 

60-80 million SE   ~10Gb   ~4 hours 100-200bp   $1,200   $0.15   Indels at homopolymers
Illumina-HiSeq-2500-Sequencer-160x118.jpg

Illumina's HiSeq 2500 Sequencer

 

Integrative Genomics Core_PacBio

PacBio RSII Platform 

 

Integrative Genomics Core_FludigmC1

Fluidigm C1 Single-Cell Auto Prep System

 

 

Illumina's cBot

 

Life-Tech-Ion-Proton-Seq-160x127.jpg

Life Technologies' Ion ProtonTM Sequencer

 

Life-Tech-Ion-One-Touch2-160x127.jpg

Life Technologies' Ion One Touch2

 

Life-Tech-3730-dna-analyzer-160x145.jpg

Life Technologies' 3730 DNA Analyzer

 

Affymetrix-GeneChip-System.160x74.gif

Affymetrix GeneChip System

 

Illumina-Hiscan-system-160x183.jpg

Illumina's Hiscan System

 

Integrative Genomics Core_Agilent Microarray System

Agilent Microarray System

 

Integrative Genomics Core_Agilent Bioanlyzer

Agilent Bioanlyzer

 

Integrative Genomics Core_Qubit Flurometer

Qubit Flurometer

 

Integrative Genomics Core_Nanodrop

Nanodrop